BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A03SP1|AL426444
(817 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1633 1606 0.0
>3x_Contig1633
Length = 12594
Score = 1606 bits (810), Expect = 0.0
Identities = 817/818 (99%), Gaps = 1/818 (0%)
Strand = Plus / Minus
Query: 1 gatcttctaccaattagtgtgatataaatactcttaccgaatagtgaaa-attgacttgg 59
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 9343 gatcttctaccaattagtgtgatataaatactcttaccgaatagtgaaacattgacttgg 9284
Query: 60 tcaatgaacccatgaataatgggttgaaaccaatcatatacggtatcaatacatgagaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9283 tcaatgaacccatgaataatgggttgaaaccaatcatatacggtatcaatacatgagaaa 9224
Query: 120 atgggatcaagcaagtatgaattccacataaacatttcgttataatcaggaatgccaggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9223 atgggatcaagcaagtatgaattccacataaacatttcgttataatcaggaatgccaggc 9164
Query: 180 ggcacttcgatatctgacctcccaacggacagaaacttctgtctcagtatgtttgtttgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9163 ggcacttcgatatctgacctcccaacggacagaaacttctgtctcagtatgtttgtttgt 9104
Query: 240 aatgtattagtaatatcaaaagtgtaactgaaataaaaggtttttgataatttaagattc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9103 aatgtattagtaatatcaaaagtgtaactgaaataaaaggtttttgataatttaagattc 9044
Query: 300 tggaatgattgtataaatcgaagttcggtggaatcccgtttcttcgttgactttgttatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9043 tggaatgattgtataaatcgaagttcggtggaatcccgtttcttcgttgactttgttatc 8984
Query: 360 ggaactaattctgtatcgtcgatatgataaatagagtgacctccgagaacggcaacctga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8983 ggaactaattctgtatcgtcgatatgataaatagagtgacctccgagaacggcaacctga 8924
Query: 420 ctcatttcagttattaccaccaaataataacatgctgtgaacctaattactcccaataaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8923 ctcatttcagttattaccaccaaataataacatgctgtgaacctaattactcccaataaa 8864
Query: 480 ccatagcctgtgagtttcttcgttaaagcatcatcgtctgcctcttcaattttacgaaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8863 ccatagcctgtgagtttcttcgttaaagcatcatcgtctgcctcttcaattttacgaaga 8804
Query: 540 acttccatcacctcgtttctcatgaaaaatacattgtcttccgcaatattcaaattgtcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8803 acttccatcacctcgtttctcatgaaaaatacattgtcttccgcaatattcaaattgtcc 8744
Query: 600 tcttcaccattgagatcaatttcaagtattcgaaacattgtctctcgtttattactagca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8743 tcttcaccattgagatcaatttcaagtattcgaaacattgtctctcgtttattactagca 8684
Query: 660 acaatgtaaatagatttcttggtttcataaatggtgtatttactcaatgtaaacttcata 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8683 acaatgtaaatagatttcttggtttcataaatggtgtatttactcaatgtaaacttcata 8624
Query: 720 gttttccgttgtttcgtggctttctgctttggtaagggctcaataggccctgaatcaata 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8623 gttttccgttgtttcgtggctttctgctttggtaagggctcaataggccctgaatcaata 8564
Query: 780 ttcatcttatcttctgattgtttatttgtatcaggttt 817
||||||||||||||||||||||||||||||||||||||
Sbjct: 8563 ttcatcttatcttctgattgtttatttgtatcaggttt 8526
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6854
Number of Sequences: 1807
Number of extensions: 6854
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 817
length of database: 10,358,551
effective HSP length: 16
effective length of query: 801
effective length of database: 10,329,639
effective search space: 8274040839
effective search space used: 8274040839
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)